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The Khovanov to Floer spectral sequence — Examples and Counterexamples

1 · Prerequisites

2 · Logical flowchart

3 · Definitions, theorems and proofs

None yet.

4 · Examples, counterexamples and false statements

CounterexampleConstruction: AI-adaptedVerification: AI-adaptedjudge pass (gpt-6-luna)verified 2026-10-22 (gpt-6.1-sol)Open item page →

The endpoints do not determine intermediate pages

Statement refuted

The false claim is that specifying the isomorphism class of the total homology of a bounded filtered chain complex determines the isomorphism class of its early spectral-sequence pages. More strongly, the false claim is that two filtered complexes with isomorphic total homology must have isomorphic E1 pages.

Facts & Assumptions

Given: Chain complexes over F2 with an increasing finite filtration preserved by the differential.

[F1]

A filtered chain complex has d(FpC)⊆FpC (Filtered chain complex).

[F2]

For the spectral sequence of an increasing filtered chain complex, E0 is the associated graded with its filtration-preserving differential, and Er+1 is the homology of (Er,dr) (Homological spectral sequence, The next page is the homology of the current page).

[F3]

A finite filtration converges to the associated graded of total homology (Bounded filtered complex spectral sequence abuts to filtered homology).

Proof

1.1F1givenconstruct

Let A be the one-generator complex F2{z} in chain degree 0, with dz=0 and filtration degree 0. Let B have generators x in degree 1 and y,z in degree 0, differential dx=y, dy=dz=0, and filtration F0B=F2{y,z}, F1B=B, F−1B=0. In both complexes d preserves the filtration, so [F1] applies.

2.1F2step 1.1algebra

In A, E0=E1=F2{z} because the differential is zero. In B, the associated graded has basis z,y in filtration 0 and x in filtration 1; its d0 is zero because dx=y strictly lowers filtration. Therefore E1(B) has dimension 3. The d1 differential sends the class of x to the class of y and sends z to zero, so E2(B)=F2{z}; likewise E2(A)=F2{z}.

2.2step 1.1algebra

The total homology of A is F2{z}. In B, the pair x↦y is contractible and the remaining class is z, so H(B)≅F2{z}≅H(A). The pair by itself has zero total homology but nonzero E1=F2{x,y}, with its d1 killing both classes.

3.1F3step 2.1step 2.2∎

By step 2.1, dim⁡E1(A)=1 while dim⁡E1(B)=3, so their E1 pages cannot be isomorphic even though their total homology groups agree by step 2.2. Convergence [F3] identifies only the limiting page with the associated graded of the shared total homology; it does not determine the earlier pages. Thus the stated endpoint-only claim is false.

ExampleConstruction: Literature-sourcedVerification: AI-adaptedverified 2026-10-22 (gpt-6.1-sol)Open item page →

The trefoil Khovanov-to-Floer rank calculation

Example

Assume AC and the ACω Heegaard Floer analytic package. Let T be the oriented left-handed trefoil, the closure of the two-strand braid σ1−3, and choose a marked point away from its three crossings. Its mirror T‾ is the closure of σ13, depicted below. Use the smoothing convention in which the zero-resolution of this mirror diagram is the through pairing and the one-resolution is the cap-cup pairing. The reduced Khovanov cohomology of T‾ over F2 has total rank 3. The double branched cover of T is a lens space L(3,1) up to orientation, and the hat Floer group of this lens space over F2 has total rank 3. Thus the E2 page and the abutment have equal total rank. Every spectral-sequence differential dr with r≥2 vanishes; the rank comparison gives no conclusion about the earlier differential d1 from E1 to E2.

\begin{tikzpicture}[scale=0.55]
\draw (-1,6) .. controls (-3,6) and (-3,0) .. (-1,0);
\draw (1,6) .. controls (3,6) and (3,0) .. (1,0);
\foreach \yt/\yb in {6/4,4/2,2/0} {
  \draw (-1,\yt) -- (1,\yb);
  \draw[white,line width=4pt] (1,\yt) -- (-1,\yb);
  \draw[black,line width=1.1pt] (1,\yt) -- (-1,\yb);
}
\node at (0,7) {$\widehat{\sigma_1^3}$};
\end{tikzpicture}

The drawing depicts the closure of the braid word; the southwest-to-northeast diagonal is drawn over the northwest-to-southeast diagonal, matching the positive-generator convention in the rank calculation. The algebraic calculation uses the smoothing cube and Frobenius maps, not the picture.

Facts & Assumptions

Given: AC, the ACω Heegaard Floer analytic package, and the left-handed trefoil and marked mirror diagram of the Example, with coefficients F2.

[F1]

The reduced Khovanov homology of a trefoil has rank three supplies the exact finite marked reduced cube calculation: the mirror has total reduced Khovanov rank three.

[F2]

The trefoil double branched cover is a lens space of order three supplies the actual annular-cover and meridian-slope identification, up to orientation, with L(3,1). Its retained full slope calculation is used without replacing the peripheral basis by an intersection number.

[F3]

The genus-one hat Floer complex of an order-three lens space has rank three supplies rank three for either orientation. The retained ordinary-hat analytic/invariance closure already accepts this whole calculation; no disk-count proof is repeated here.

[L1]

The Khovanov to branched-cover Heegaard Floer spectral sequence is the separate actual spectral-sequence existence input. Its surgery-cube and unlink-map constructions are not consequences of [F1]–[F3].

Proof

1.1F1F2F3L1given

Under the stated assumptions, [L1] supplies the spectral sequence for T. Apply [F1] to its specified marked mirror to obtain dim⁡E2=3. Apply [F2] and [F3] to obtain abutment dimension 3, regardless of the allowed orientation reversal. The finite image filtration on that abutment has associated graded E∞, whose total dimension equals the abutment dimension, so dim⁡E∞=3 as well.

2.1F1F2F3L1step 1.1algebra∎

For any finite-dimensional page with square-zero differential d, rank-nullity gives dim⁡H=dim⁡E−2rank⁡d. The rank comparison here is between E2 and E∞, whose total dimensions are both 3. A nonzero differential dr for r≥2 would strictly lower the total dimension, so every such differential vanishes. This argument does not control d1, which is the earlier differential used to form E2. The OS sequence's existence for this diagram still requires [L1]; the dimension argument does not construct it.

Sources